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Table 3 Proportions of differentially abundant phyla and genera in selected groups using Metastats analysis (P ≤ 0.05). Samples before enrichment (t = 0) and samples after enrichment in either BPW or EE-broth for 16 h were compared

From: Mungo bean sprout microbiome and changes associated with culture based enrichment protocols used in detection of Gram-negative foodborne pathogens

Genera Phyla t = 0 BPW 37 °C (16 h) P value
  Firmicutes 0.057 ± 0.0001 0.092 ± 0.0003 0.008
Acinetobacter   0.032 ± 0.001 0.008 ± 0.00007 0.043
Duganella   0.049 ± 0.0004 0 0.005
Pseudomonas   0.151 ± 0.004 0.015 ± 0.0006 0.024
  t = 0 BPW 42 °C (16 h)  
  Firmicutes 0.002 ± 0.000008 0.207 ± 0.023 0.337
Duganella   0.024 ± 0.0001 0 0.005
Pseudomonas   0.074 ± 0.0009 0.009 ± 0.00006 0.014
  t = 0 EE 37 °C (16 h)  
  Bacteroidetes 0.046 ± 0.001 0.002 ± 0.000008 0.002
Duganella   0.024 ± 0.001 0.002 ± 0.000008 0.041
Kosakonia   0.027 ± 0.005 0.002 ± 0.000008 0.046
Pseudomonas   0.074 ± 0.0009 0.007 ± 0.0001 0.024
  t = 0 EE 42 °C (16 h)  
  Bacteroidetes 0.046 ± 0.001 0.002 ± 0.000008 0.045
Duganella   0.024 ± 0.0001 0 0.018
Pseudomonas   0.074 ± 0.0009 0.007 ± 0.00005 0.023
  BPW 37 °C (16 h) EE 37 °C (16 h)  
  Firmicutes 0.231 ± 0.018 0.0003 ± 0.0001 0.021
  Proteobacteria 0.286 ± 0.017 0.499 ± 0.0000005 0.015
Acinetobacter   0.039 ± 0.0000009 0.0002 ± 0.00000004 0
Kosakonia   0.018 ± 0.00005 0.002 ± 0.000005 0.01
  BPW 37 °C (16 h) BPW 42 °C (16 h)  
Kosakonia   0.018 ± 0.00008 0.002 ± 0.0000005 0.028
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Microbiome

ISSN: 2049-2618

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