| |
Mean reads (% of dataset total) at:
| | | | |
Significant after a MHC?
|
|---|
|
OTU
|
4 h
|
2 weeks
|
Exponentiated coefficient
|
2.5 % CI
|
97.5 % CI
|
P value
|
|---|
|
Enterococcus
|
26.61
|
34.00
|
1.0008
|
1.0001
|
1.0015
|
0.034
|
No
|
|
Bifidobacterium
|
7.15
|
10.78
|
1.0028
|
1.0010
|
1.0046
|
0.002
|
Yes
|
|
Veillonella1
|
7.06
|
1.12
|
0.9936
|
0.9903
|
0.9968
|
<0.001
|
Yes
|
|
Veillonella2
|
2.03
|
0.09
|
0.9892
|
0.9868
|
0.9916
|
<0.001
|
Yes
|
- The OTUs shown shift significantly in relative abundance in the simple faecal community dataset over 2 weeks of storage at room temperature. Mean sequencing reads in the samples stored for 4 h and those stored for 2 weeks are shown. The exponentiated coefficients were provided by the GLMs and approximate the rate of change of relative abundance for each OTU per hour of storage; 2.5 and 95 % CI indicate the 95 % confidence interval around the exponentiated coefficient. P values indicate the significance of the coefficient (prior to MHC for nine tested OTUs). The final column indicates whether the result would still be significant after a Bonferroni correction
