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Table 2 Sequence read statistics and alpha diversity metrics for each of the 14 stool samples examined for this study

From: Characterizing the fecal microbiota of infants with botulism

Botulism Sample Total number of readsa Number of reads passing quality filteringa Number of OTUs observeda Shannon diversity indexa
Confirmed CDC68129 747314 460195 496 2.3
CDC68058 796510 376891 850 2.9
CDC69068 706703 440769 637 2.5
CDC68083 720976 510882 2242 4.4
CDC68116 760653 543541 475 0.7
CDC68192 864853 446933 928 3.4
CDC68090 589121 369066 1615 3.2
CDC68126 496815 396233 994 3.0
Non-confirmed CDC68053 595735 433809 418 1.5
CDC69114 723322 496246 517 2.4
CDC68112 715786 285335 670 2.2
CDC68122 831044 602856 676 2.1
CDC69078 619394 392261 1117 3.8
CDC69062 819457 412327 998 3.4
  1. aHighest and lowest value in each column recorded in bold