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Table 5 Xander processing statistics with kmer length of 45 and count 1

From: Xander: employing a novel method for efficient gene-targeted metagenomic assembly

Sample name HMPa C1 Corn
File size (GB) 1.7 46 349
Build memory (GB) 1 60 200
Build time (h) 0.3 6.4 41
Find starting kmers (h)b 0.1 3.6 27.0
Search nifH timec 0.3 (min) 1 (min) 6 (min)
Search nirK timec NA 48 (min) 36.7 (h)
Search rplB timec 1.1 (min) 228 (min) 49.4 (h)
  1. aHMP-defined community data
  2. bFor single thread. Can be multi-threaded or run in parallel
  3. cFor single thread. Can be run in parallel