From: Collection media and delayed freezing effects on microbial composition of human stool
 |  | ICC | |||||
---|---|---|---|---|---|---|---|
 | Relativea abundance | Time 3 days vs. Time 0 |  | Time 7 days vs. Time 0 | |||
 | RNAlater alone | RNAlater + Kanamycin | RNAlater + Ciprofloxacin | RNAlater alone | RNAlater + Kanamycin | RNAlater + Ciprofloxacin | |
p__Actinobacteria | 2.10Â % | 0.96 | 0.98 | 0.97 | 0.98 | 0.92 | 0.95 |
p__Bacteroidetes | 14.60Â % | 0.76 | 0.82 | 0.81 | 0.70 | 0.79 | 0.69 |
p__Firmicutes | 75.10Â % | 0.73 | 0.81 | 0.77 | 0.68 | 0.77 | 0.69 |
p__Proteobacteria | 0.60Â % | 0.60 | 0.77 | 0.54 | 0.64 | 0.88 | 0.62 |
PD_WT | Â | 0.64 | 0.47 | 0.56 | 0.85 | 0.62 | 0.64 |
Chao1 | Â | 0.40 | 0.03 | 0.12 | 0.76 | 0.44 | 0.34 |
Observed_species | Â | 0.53 | 0.23 | 0.36 | 0.78 | 0.53 | 0.41 |
Shannon | Â | 0.77 | 0.77 | 0.76 | 0.88 | 0.80 | 0.69 |
Unweighted.PCoA1 | Â | 0.90 | 0.88 | 0.91 | 0.97 | 0.91 | 0.92 |
Unweighted.PCoA2 | Â | 0.65 | 0.46 | 0.58 | 0.88 | 0.78 | 0.64 |
Unweighted.PCoA3 | Â | 0.79 | 0.78 | 0.64 | 0.94 | 0.93 | 0.80 |
Weighted.PCoA1 | Â | 0.80 | 0.83 | 0.86 | 0.61 | 0.80 | 0.79 |
Weighted.PCoA2 | Â | 0.93 | 0.95 | 0.97 | 0.96 | 0.96 | 0.97 |
Weighted.PCoA3 | Â | 0.85 | 0.91 | 0.82 | 0.90 | 0.86 | 0.87 |
Unweighted UniFrac | Â | 0.70 | 0.71 | 0.70 | 0.76 | 0.76 | 0.71 |
Weighted UniFrac | Â | 0.78 | 0.86 | 0.87 | 0.75 | 0.86 | 0.80 |