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Table 1 Percent correct classification of host provenance according to assemblages in the vaginal microbiomes of asymptomatic women

From: BioMiCo: a supervised Bayesian model for inference of microbial community structure

 

Median Nugent score category

 

“Elevated score”

“Normal score”

Analysis

High (≥7)

Intermediate (7–4)

Low (<4)

Approach 1

90

54

NA

Approach 2

83

43

38

  1. Percent correct classification is based on five replications of random assignment of two thirds of the samples to a training set and using the remaining one third for testing host provenance. Approach 1 is an analysis of individuals with elevated scores and training only on host provenance. Approach 2 is an analysis of all individuals and training on samples labeled according to both host provenance and Nugent score.