Comparison category | Host species | Anatomic site | Beta diversity metric | R statistic and significance |
---|---|---|---|---|
CPS colonization status (Yes or no) | Humans | Nares | Weighted UniFrac | 0.008 |
Unweighted UniFrac | 0.0389 | |||
Bray-Curtis | −0.0165 | |||
Binary Jaccard | 0.0113 | |||
 | Humans | Inguinal/axilla | Weighted UniFrac | 0.1514 |
Unweighted UniFrac | 0.1391 | |||
Bray-Curtis | 0.2577 | |||
Binary Jaccard | 0.1983 | |||
 | Cats | Nares | Weighted UniFrac | −0.0729 |
Unweighted UniFrac | −0.0683 | |||
Bray-Curtis | −0.0626 | |||
Binary Jaccard | −0.0459 | |||
 | Cats | Oral cavity | Weighted UniFrac | −0.0356 |
Unweighted UniFrac | −0.0347 | |||
Bray-Curtis | −0.0717 | |||
Binary Jaccard | −0.0480 | |||
 | Dogs | Nares | Weighted UniFrac | 0.0994 |
Unweighted UniFrac | 0.0369 | |||
Bray-Curtis | 0.1299 | |||
Binary Jaccard | 0.1483 | |||
 | Dogs | Oral cavity | Weighted UniFrac | 0.1491 |
Unweighted UniFrac | 0.2495* | |||
Bray-Curtis | 0.1265 | |||
Binary Jaccard | 0.1751 | |||
S. aureus colonization status (Yes or no) | Humans | Nares | Weighted UniFrac | −0.0063 |
Unweighted UniFrac | −0.0938 | |||
Bray-Curtis | −0.0845 | |||
Binary Jaccard | −0.1714 | |||
 | Humans | Inguinal/axilla | Weighted UniFrac | No S. aureus at this time point |
Unweighted UniFrac | ||||
Bray-Curtis | ||||
Binary Jaccard | ||||
 | Cats | Nares | Weighted UniFrac | −0.0228 |
Unweighted UniFrac | −0.1451 | |||
Bray-Curtis | −0.1280 | |||
Binary Jaccard | −0.0980 | |||
 | Cats | Oral cavity | Weighted UniFrac | −0.2021 |
Unweighted UniFrac | −0.1815 | |||
Bray-Curtis | −0.220 | |||
Binary Jaccard | −0.1398 | |||
 | Dogs | Nares | Weighted UniFrac | −0.0540 |
Unweighted UniFrac | −0.1028 | |||
Bray-Curtis | −0.1452 | |||
Binary Jaccard | −0.2037 | |||
 | Dogs | Oral cavity | Weighted UniFrac | −0.1012 |
Unweighted UniFrac | −0.1176 | |||
Bray-Curtis | −0.1831 | |||
Binary Jaccard | −0.0311 | |||
MRSA colonization status (Yes or no) | Humans | Nares | Weighted UniFrac | −0.0236 |
Unweighted UniFrac | −0.1443 | |||
Bray-Curtis | −0.0718 | |||
Binary Jaccard | −0.1910 | |||
 | Humans | Inguinal/axilla | Weighted UniFrac | 0.1150 |
Unweighted UniFrac | −0.1172 | |||
Bray-Curtis | 0.1653 | |||
Binary Jaccard | 0.0008 | |||
 | Cats | Nares | Weighted UniFrac | −0.2287 |
Unweighted UniFrac | −0.2056 | |||
Bray-Curtis | −0.2460 | |||
Binary Jaccard | −0.2810 | |||
 | Cats | Oral cavity | Weighted UniFrac | −0.2582 |
Unweighted UniFrac | −0.0009 | |||
Bray-Curtis | −0.2450 | |||
Binary Jaccard | −0.0194 | |||
 | Dogs | Nares | Weighted UniFrac | −0.2705 |
Unweighted UniFrac | −0.0066 | |||
Bray-Curtis | −0.2904 | |||
Binary Jaccard | −0.2473 | |||
 | Dogs | Oral cavity | Weighted UniFrac | No MRSA at this time point |
Unweighted UniFrac | ||||
Bray-Curtis | ||||
Binary Jaccard |