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Table 1 Top 25 microbial protein families detected in the mouse stool sample

From: A straightforward and efficient analytical pipeline for metaproteome characterization

UniProt protein family

ORFs a

Peptides a

PSMs

TonB-dependent receptor family

255

345

1,433

GTP-binding elongation factor family

235

379

4,676

NifJ family

209

278

1,699

ATPase alpha/beta chains family

171

213

1,168

Chaperonin (HSP60) family

138

200

1,294

Glyceraldehyde-3-phosphate dehydrogenase family

110

153

1,186

ABC transporter superfamily

108

119

420

Glu/Leu/Phe/Val dehydrogenases family

89

127

637

Class-II aminoacyl-tRNA synthetase family

84

95

356

RNA polymerase beta chain family

74

93

416

Phosphoglycerate kinase family

72

92

489

Enolase family

69

105

765

Glycogen phosphorylase family

67

95

482

Heat shock protein 70 family

63

100

646

RNA polymerase beta′ chain family

63

86

440

Binding-protein-dependent transport system permease family

54

59

241

Class-I aminoacyl-tRNA synthetase family

54

61

217

Phosphoenolpyruvate carboxykinase family

54

78

402

Polyribonucleotide nucleotidyltransferase family

50

64

338

LDH/MDH superfamily

49

69

325

Triosephosphate isomerase family

49

68

373

Phosphohexose mutase family

46

56

181

Acyl-CoA dehydrogenase family

44

59

316

RNA polymerase alpha chain family

43

67

283

GPI family

41

49

211

  1. anon-redundant.