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Table 1 Top 25 microbial protein families detected in the mouse stool sample

From: A straightforward and efficient analytical pipeline for metaproteome characterization

UniProt protein family ORFs a Peptides a PSMs
TonB-dependent receptor family 255 345 1,433
GTP-binding elongation factor family 235 379 4,676
NifJ family 209 278 1,699
ATPase alpha/beta chains family 171 213 1,168
Chaperonin (HSP60) family 138 200 1,294
Glyceraldehyde-3-phosphate dehydrogenase family 110 153 1,186
ABC transporter superfamily 108 119 420
Glu/Leu/Phe/Val dehydrogenases family 89 127 637
Class-II aminoacyl-tRNA synthetase family 84 95 356
RNA polymerase beta chain family 74 93 416
Phosphoglycerate kinase family 72 92 489
Enolase family 69 105 765
Glycogen phosphorylase family 67 95 482
Heat shock protein 70 family 63 100 646
RNA polymerase beta′ chain family 63 86 440
Binding-protein-dependent transport system permease family 54 59 241
Class-I aminoacyl-tRNA synthetase family 54 61 217
Phosphoenolpyruvate carboxykinase family 54 78 402
Polyribonucleotide nucleotidyltransferase family 50 64 338
LDH/MDH superfamily 49 69 325
Triosephosphate isomerase family 49 68 373
Phosphohexose mutase family 46 56 181
Acyl-CoA dehydrogenase family 44 59 316
RNA polymerase alpha chain family 43 67 283
GPI family 41 49 211
  1. anon-redundant.