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Figure 2 | Microbiome

Figure 2

From: PathoScope 2.0: a complete computational framework for strain identification in environmental or clinical sequencing samples

Figure 2

PathoLib module workflow. The PathoLib module will extract a reference library containing all genomes, chromosomes, transcripts, and other sequence fragments in the NCBI redundant nucleotide database associated user-defined taxonomic clade (NCBI taxID). If a higher-level taxID is given, PathoLib will optionally extract all sequences from lower-lever taxonomic designations based on the NCBI taxonomy tree.

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Microbiome

ISSN: 2049-2618

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