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Figure 3 | Microbiome

Figure 3

From: Community genomic analyses constrain the distribution of metabolic traits across the Chloroflexi phylum and indicate roles in sediment carbon cycling

Figure 3

Predicted energy metabolism for RBG-2. Proteins and complexes are colored based on the taxonomic affiliation of the best blast match from the NCBI nr database (white = no clear Phylum affiliation). Abbreviations: 1 - glucose phosphate isomerase, 2 - phosphofructokinase, 3 - fructose bisphosphate aldolase, 4 - triose phosphate isomerase, 5 - glyceraldehyde-3-phosphate dehydrogenase, 6 - phosphoglycerate kinase, 7–2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, 8 - enolase, 9 - pyruvate kinase, 10 - fructose-1,6-bisphosphatase I, 11 - pyruvate carboxylase, 12 - PEP carboxykinase, 13 - RE-citrate synthase, 14 - aconitate hydratase 1, 15 - isocitrate dehydrogenase, 16 - 2-oxoglutarate:ferredoxin oxidoreductase, 17 - succinyl-CoA synthetase, 18 - succinate dehydrogenase, 19 - fumarate hydratase, 20 - formate dehydrogenase, 21 - formyltetrahydrofolate synthetase [formate-tetrahydrofolate ligase], 22 - bifunctional methenyltetrahydrofolate cyclohydrolase/methelynetetrahydrofolate dehydrogenase, 23 - methylenetetrahydrofolate reductase, 2-HAD - 2-haloacid dehalogenase, AAT - aspartate amino transferase, ACDS-I - acetyl-CoA synthetase (ADP-dependent), ACDS/CODH - acetyl-CoA decarbonylase/synthase/carbon monoxide dehydrogenase complex, AthLS - pyrogallol hydroxytransferase large and small subunits, ETF - electron transporting flavoprotein, GHyd - glycoside hydrolase, Hdr - heterodisulfide reductase, Hup - Uptake hydrogenase, Mbh - membrane-bound hydrogenase, ME - malic enzyme, Mvh - F420 non-reducing hydrogenase, OFOR - oxo-acid:ferredoxin oxidoreductase, PFOR - pyruvate:ferredoxin oxidoreductase, THF - tetrahydrofolate, VOR - 2-ketoisovalerate:ferredoxin oxidoreductase.

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