Co-occurrence of anaerobic bacteria in colorectal carcinomas

Microbiome

Table 1 Sequence statistics

Sample type			Control				Tumor
Number of patient samples			65				65
Read pairs	Minimum	Maximum	Mean ± SD	Proportion of raw read pairs (%)	Minimum	Maximum	Mean ± SD	Proportion of raw read pairs (%)
Raw sequenced	2,393,763	5,991,413	3,854,055 ± 731,259	100.0	1,467,161	10,121,411	4,371,501 ± 1,435,367	100.0
Quality filtered and host subtracted	747,357	2,404,589	1,259,480 ± 288,807	32.7	507,402	3,426,796	1,403,283 ± 475,582	32.0
Mapping unambiguously to microbial genomes	646	792,618	44,625 ± 103,949	1.2	445	219,314	27,191 ± 39,676	0.6
Distinct microbial genera observed			372				441

ISSN: 2049-2618