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Table 2 Clones generated from genomic DNA extracted from cecum samples

From: The effects of intestinal microbial community structure on disease manifestation in IL-10-/- mice infected with Helicobacter hepaticus

Treatment

 
 

H. hepaticus infected

Clones/sample (number)

Cefoperazone (cef) treatment

  

Control 1 (no cef)

No

93, 54, 93 (3)

Control 2 (1 day recovery from cef)

No

90, 75, 92 (3)

Control 3 (6 wk recovery from cef)

No

95, 90 (2)

Community 1 (no cef)

Yes

83, 92, 86 (3)

Community 2 (1 day recovery from cef before infection)

Yes

150, 163, 76 (3)

Community 3 (6 wk recovery from cef before infection)

Yes

93, 72, 58 (3)

Vancomycin (vanc) treatment

  

Control 4 (no vanc)

No

95, 95, 95 (3)

Control 5 (vanc)

No

94, 84, 94 (3)

Control 6 (vanc + 11 days recovery)

No

95, 93, 92 (3)

Community 4 (no vanc)

Yes

89, 89, 92, 93, 94 (5)

Community 5 (vanc)

Yes

94, 95, 93, 90, 92, 94 (6)

Community 6 (vanc + 11 days recovery)

Yes

94, 91, 92, 93, 91, 90, 96 (7)