Fig. 5

Recombination and host specificity. a Network of host range and genome variability among vANI95 clusters. Edges represent viral entry proteins (VEPs) dissimilarity, and nodes represent hosts and viruses. Only the vANI95 clusters with closely related neighbors (RAP-AAI > 90%) were included in this network. b Divergence of VEPs among closely related viruses in East Africa. c Recombination within Coronaviridae. Genomes involved in recombination are represented as segments surrounding the circles. The major parent, minor parent, and recombinant were connected according to the recombination position of the recombinant. The colors of the ribbons are consistent with those of the major/minor parent of the recombinant. The major parents are connected with ribbons with black borders. Minor parents are connected with ribbons without borders. d Genomic distribution of recombination breakpoints in Coronaviridae. For each recombinant (as an individual gray line), genomic regions flanked by recombination breakpoints are indicated as blue rectangles