Fig. 3
From: Virome diversity shaped by genetic evolution and ecological landscape of Haemaphysalis longicornis
Virus diversity in genetic clades of H. longicornis. a Between-group clustering of viromes between genetic clades of H. longicornis by t-SNE analysis. b Shannon indexes of tick viromes between genetic clades of unfed H. longicornis (nclade1 = 80, nclade2 = 32). Boxplot elements: center line, median; box limits, upper and lower quartiles; whiskers (error bars), the highest and lowest points within 1.5 interquartile range of the upper and lower quartiles. The P-value was calculated using a two-sided Wilcoxon rank-sum test. c Abundance of each virus identified in this study. The fed tick samples in clade 1 are indicted by red solid circles, and those in clade 2 are indicated by blue solid triangles. The viruses shown in bold is only present in fed tick samples. Each cell in the heat map represents the normalized abundance of viral reads