Table 5 Performance of the 8 AMR prediction models on their respective test sets and MGS2AMR output
Antibiotic | Precision | Recall | Accuracy | MCC |
|---|---|---|---|---|
Ampicillin | 1.00/0.98 | 1.00/0.99 | 1.00/0.97 | 0.94/0.74 |
Cefepime | 0.91/0.85 | 0.80/0.78 | 0.78/0.74 | 0.46/0.37 |
Gentamicin | 0.93/0.73 | 0.95/0.89 | 0.92/0.81 | 0.83/0.63 |
Meropenem | 0.86/0.74 | 0.74/0.78 | 0.78/0.74 | 0.57/0.48 |
Tetracycline | 0.79/0.61 | 0.99/0.94 | 0.86/0.75 | 0.75/0.57 |
Tobramycin | 0.95/0.76 | 0.99/0.97 | 0.96/0.84 | 0.91/0.70 |
Trimethoprim-sulfamethoxazole | 0.97/0.86 | 0.95/0.93 | 0.93/0.86 | 0.81/0.70 |
Vancomycin | 1.00/0.97 | 1.00/1.00 | 1.00/0.98 | 1.00/0.95 |