Table 1 Genome statistics for T. rhizospherense and other complete Saccharibacteria genomes
Environment | Genome size (bp) | Gene number | Unannotated genes | Average gene size (bp) | Total coding sequence (bp) | Coding density (%) | CAZy genes | Unduplicated CAZy genes | Publication | |
|---|---|---|---|---|---|---|---|---|---|---|
Candidatus T. rhizospherense | Rhizosphere | 1,450,269 | 1531 | 704 | 843.3 | 1,280,911 | 88 | 58 | 27 | This study |
47_87 scnpilot | Wastewater | 900,471 | 918 | 376 | 896 | 822,552 | 91 | 30 | 17 | [17] |
49_20 scnpilot | Wastewater | 904,897 | 933 | 362 | 891.5 | 831,756 | 92 | 28 | 14 | [17] |
GW2011 GWC2 44_17 | Aquifer | 1,038,683 | 1093 | 482 | 860.3 | 939,465 | 90 | 40 | 20 | [1] |
RAAC3_TM7 | Aquifer | 845,464 | 921 | 355 | 835.5 | 769,452 | 91 | 28 | 17 | [8] |
TM7x | Human mouth | 705,138 | 711 | 241 | 919.2 | 653,574 | 93 | 30 | 17 | [7] |
Candidatus S. aalborgensis | Wastewater | 1,013,781 | 1056 | 481 | 876.5 | 925,533 | 91 | 30 | 17 | [16] |
Difference from average | 32.4% | 33.2% | 39.1% | − 3.7% | 30.6% | − 3% | 39.9% | 31.7% |