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Fig. 7 | Microbiome

Fig. 7

From: The detailed analysis of the microbiome and resistome of artisanal blue-veined cheeses provides evidence on sources and patterns of succession linked with quality and safety traits

Fig. 7

Assembly-based analysis of the resistome and its association with taxa and mobile genetic elements. Heatmaps representing the number of contigs found harboring ARGs related to the antibiotic families indicated on columns, while the rows indicate the taxonomic assignment of contigs by Kraken2 (A). The small heatmap represents only those ARG-carrying contigs classified as plasmidic contigs according to the Platon pipeline. Only those antibiotic families and taxa with five or more contigs are included. Schematic representation of all the ARG-carrying integrons found (B). Arrow colors indicate the presence of the integrase gene (“intI”), “attc” regions, ARGs (ARG name indicated), or genes coding for proteins not assigned as ARG (indicated as “protein”). Text color of taxonomical assignment (performed by Kraken2) indicates if the contig is plasmidic or chromosomic, according to the Platon pipeline. Circle colors indicate the type of sample from where the contig was obtained

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Microbiome

ISSN: 2049-2618

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